The evolutionary landscape of alternative splicing in vertebrate species


Barbosa-Morais N. L., Irimia M., Pan Q., Xiong H. Y., Gueroussov S., Lee L. J., ...Daha Fazla

Science, cilt.338, sa.6114, ss.1587-1593, 2012 (SCI-Expanded, Scopus) identifier identifier

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 338 Sayı: 6114
  • Basım Tarihi: 2012
  • Doi Numarası: 10.1126/science.1230612
  • Dergi Adı: Science
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus
  • Sayfa Sayıları: ss.1587-1593
  • Isparta Uygulamalı Bilimler Üniversitesi Adresli: Hayır

Özet

How species with similar repertoires of protein-coding genes differ so markedly at the phenotypic level is poorly understood. By comparing organ transcriptomes from vertebrate species spanning ∼350 million years of evolution, we observed significant differences in alternative splicing complexity between vertebrate lineages, with the highest complexity in primates. Within 6 million years, the splicing profiles of physiologically equivalent organs diverged such that they are more strongly related to the identity of a species than they are to organ type. Most vertebrate species-specific splicing patterns are cis-directed. However, a subset of pronounced splicing changes are predicted to remodel protein interactions involving trans-acting regulators. These events likely further contributed to the diversification of splicing and other transcriptomic changes that underlie phenotypic differences among vertebrate species.